Holmes Lab Servers

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Cluster Servers (see also: Babylon Cluster)

sheridan

  • Sun Grid Engine
    • initscripts: /etc/init.d/sgemaster, /etc/init.d/sgebdb
    • config and data files: under /opt/sge
    • config tool:
$ ssh -X sheridan
$ qmon &
  • dnsmasq - DNS and dhcp inside the cluster
    • initscript: /etc/init.d/dnsmasq
    • config: /etc/dnsmasq.conf
    • data files: /etc/ethers, /etc/dnshosts
  • mysql - has data from fly screen, RNA localization work, ? (fungi, neurospora)
    • initscript: /etc/init.d/mysqld
    • config: /etc/my.cnf
    • data files: under /var/lib/mysql

garibaldi

  • ipsec vpn
    • config: under /etc/racoon
  • iptables firewall
    • config: /etc/sysconfig/iptables
  • DNS
    • config: under /service/tinydns/root
    • there ought to be a second DNS server; it used to be on the sinclair (former jbrowse.org machine, now with dead hard drive) but currently (3/18/11) there's no second server.

lorien

  • NFS
    • initscript: /etc/init.d/nfs, /etc/init.d/portmap, /etc/init.d/nfslock
    • config: /etc/exports
  • TSMBackupSystem
  • backup, lab servers -> lorien
    • cron job, config: ~avu/cron
    • backup files: under ~avu/backups

Serial Concentrator

  • opengear CM4148
    • config: [[1]], user "root"

Lab (Stanley) Servers

  • CVS (buffy)
  • mail? (wesley)
  • gateway (m0n0wall)
    • config: [[2]], user "admin"
  • wifi
    • configured with the apple tools
  • printer
  • phoenix

EC2

jbrowse.org

Root volume and UCSC data volume are on EBS; DNS is through godaddy at the moment

  • apache
  • wordpress

-- Mitch Skinner - 18 Mar 2011