Yb To Do

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  • 12 fly scan
  • Gene prediction tools
    • enembl.org/apollo
    • gff2ps
    • rgd.mcw.edu/metagene
    • promoter pred: rulai.cshl.org/tools/firstef
    • fruitfly.org/seq_tools/genie.html
    • genes.mit.edu/genscan.html
  • Create workflow diagrams for Xrate training and prediction.
  • Does Ant compile on cluster?

Quals

  • Proposal:
    • Primary: ncRna pipeline
    • Secondary: using discriminative training

-- TWiki Guest - 21 Jul 2006