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- Address: 381 Stanley Hall, University of California, Berkeley, CA 94720-3220.
- Phone: (510) 666 - 2791.
Group members
Past members
- Past members
- Grad students: SharonChao, YuriBendana, AvinashVaradarajan
- Undergrad students: KennyDuong, SamanManesh, PatrickCharoenpong, GabrielWu, RobertWu
- Specialists: AndrewUzilov, PeteKlosterman
- Programmers: JeremyLemieux
- GSIs: VictorChubukov, AngiChau, YuriBendana, JoshKittleson
Collaborators
- Collaborators/colleagues, past & present
| Free software | ChrisMungall, LincolnStein, StephenCarrier, JasonStajich, GuySlater, MarcinJoachimiak, EwanBirney |
| Statistical alignment | IstvanMiklos, GertonLunter, JohnHuelsenbeck, RasmusNielsen, MarcSuchard, JotunHein, BenPaten |
| Multiple RNA alignment | SeanEddy, AlexCoventry, SamGriffithsJones, PaulGardner, AlexBateman, LiorPachter |
| Drosophila annotation | LiorPachter, MikeEisen, SueCelniker, SuziLewis |
| RNA structural evolution | StevenBrenner, JenniferDoudna |
| Protein structure evolution | TomPeat, JanetNewman, KimmenSjolander, BillBruno |
| Codon evolution | NickGoldman, CarolinKosiol, RichardGoldstein |
| Transposons | CedricFeschotte, RichardDurbin, DavidSchaffer |
| Comparative genomics | CalebWebber, ChrisPonting, AndreasHeger |
| Visualization/AJAX | LincolnStein, ToddVision, SteveTaylor, MarcinJoachimiak |
Info for UC Berkeley students
If you are a UC Berkeley undergrad or graduate student, and are interested in doing a rotation with our group to develop algorithms for computational evolutionary genomics and RNA/protein design, contact IanHolmes
(see also this page: HolmesLabGraduateProjects). |