|
| Search: Fly *Zipcodes[^A-Za-z]
|
Topics in Main web:
|
Changed: now 13:56 GMT
|
Changed by:
|
|
FruitflyRiboClub
|
23 Jan 2008 - 13:24 - r1.41
|
IanHolmes
|
|
Fruitfly ncRNA journal club // Time // 2-4pm. // Venue // 321 StanleyHall. // Dates // 01 Nov 2007 RB: RNAz // 08 Nov 2007 YB: , IH: zipcodes // 15 Nov 2007 MS: Evofold (fly section) // 22 Nov 2007 Thanksgiving holiday (no meeting) // 29 Nov 2007 Postponed (lab move) // 06 Dec 2007 Postponed // 13 Dec 2007 IH: // 10 Jan 2008 RB: // 31 Jan 2008 // Papers // Alternate between "bio" and "informatics" papers? // Bio reviews: // ncRNA section (p102-103) ...
|
|
|
MakefileLabMeeting
|
23 Oct 2008 - 09:23 - r1.144
|
IanHolmes
|
|
Makefile lab meeting // 12 noon, Wednesday 4/4, 2007, 425 Hearst Mining Building (see LabMeeting) // The topic of this meeting was the use of automated build tools for bioinformatics pipelines. // (See, for example, this intro on nodalpoint.org, // or .) // Conclusions // The conclusions of the meeting are summarized on the MakeComparison page. // Miscellaneous notes // George recommended Rose-DB as a Perl database interface. // Agenda // Proposed assignments ...
|
|
|
XratePipeline
|
19 Oct 2007 - 01:58 - r1.52
|
IanHolmes
|
|
xrate comparative genome annotation pipeline // A work in progress... // 1 (MANUAL STEP) repeat detection, softmasking // (TODO) build RepeatMasker // (TODO) install Piler // 1 (MANUAL STEP) gene prediction; ortholog assignment; anchoring; multiple alignment // (TODO) automate MercatorTutorial (strictly, Mercator PECAN) // (TODO) build SNAP, install WUBlast (as per tutorial)... // (TODO) investigate use of Exonerate in place of SNAP, WUBlast // 1 (SEMI-AUTOMATED ...
|
|
Number of topics: 3
|
