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Inter-Wiki Link Rules (or Links to other Sites)

This topic lists all aliases needed to map Inter-Site links to external wikis/sites.

Whenever you write ExternalSite:Page it will be linked automatically to the page on the external site. The link points to the URL corresponding to the ExternalSite alias below, concatenated to the Page you choose. Example: Type Wiki:RecentChanges to get Wiki:RecentChanges, the RecentChanges page at the original Wiki site.

Biowiki repository & internal links

Alias:	URL:	Tooltip Text:
Ticket	https://rt.biowiki.org/rt/Ticket/Display.html?id=$page	Biowiki Request Tracker ticket #$page
BiowikiCvsDir	http://cvs.biowiki.org:8000/viewcvs/$page	Biowiki CVS repository directory '$page'
BiowikiCvs	http://cvs.biowiki.org:8000/viewcvs/checkout/$page?content-type=text/vnd.viewcvs-markup	Biowiki CVS repository file '$page'
BiowikiCvsCheckout	http://cvs.biowiki.org:8000/viewcvs/checkout/$page	Biowiki CVS repository file '$page'
BiowikiPerl	http://cvs.biowiki.org:8000/viewcvs/perl/$page?content-type=text/plain	Biowiki Perl CVS repository file '$page'
BiowikiGff	https://raw.github.com/ihh/gfftools/master/$page	GFF tools github repository file '$page'
DartRepository	http://github.com/ihh/dart/blob/master/$page	DART git repository page for file 'dart/$page' at github
DartRepositoryDir	http://github.com/ihh/dart/tree/master/$page	DART git repository, directory 'dart/$page' at github
DartCheckout	http://github.com/ihh/dart/raw/master/$page	DART git repository, current version of file '$page' at github
DartSrc	http://github.com/ihh/dart/blob/master/src/$page	DART git repository, C++ source file 'dart/src/$page' at github
DartSrcDir	http://github.com/ihh/dart/tree/master/src/$page	DART git repository, directory 'dart/src/$page' at github
DartPerl	http://github.com/ihh/dart/blob/master/perl/$page	DART git repository, Perl source file 'dart/perl/$page' at github
DartPerlCheckout	http://github.com/ihh/dart/blob/master/perl/$page	DART git repository, Perl source file 'dart/perl/$page' at github
DartPython	http://github.com/ihh/dart/blob/master/python/$page	DART git repository, Python source file 'dart/python/$page' at github
DartGrammar	http://github.com/ihh/dart/blob/master/grammars/$page	DART git repository, xrate grammar file 'dart/grammars/$page' at github
DartData	http://github.com/ihh/dart/blob/master/data/$page	DART git repository, file 'dart/data/$page' at github
JBrowseSrc	https://github.com/jbrowse/jbrowse/tree/master/$page	JBrowse repository file 'jbrowse/$page'
BrowserSrc	https://github.com/jbrowse/jbrowse/tree/master/js/$page	JBrowse Javascript source file 'jbrowse/js/$page'
JBrowseWiki	http://jbrowse.org/twiki/bin/view/$page	JBrowse test wiki page '$page'
JBrowseWikiPub	http://jbrowse.org/twiki/pub/$page	JBrowse test wiki attachment $page
JBrowseSite	http://jbrowse.org/$page	jbrowse.org/$page
PrismGrammar	http://cvs.biowiki.org:8000/viewcvs/prism-grammars/$page?view=markup	PRISM grammar repository, file '$page'

Bio-related interwiki links

Alias:	URL:	Tooltip Text:	Name service (optional):
XP	http://www.xpdeveloper.com/xpdwiki/Wiki.jsp?page=$page	xpdeveloper.com wiki
YaleCGI	http://twiki.med.yale.edu/twiki2/bin/view/CGIapp/$page	'$page' on Yale CGI wiki
BKB	http://apps.bioneq.qc.ca/twiki/bin/view/Knowledgebase/$page	Bioinformatics Knowledge Base entry for $page
AAA	http://rana.lbl.gov/drosophila/wiki/index.php/$page	Fruitfly AAA (assembly/alignment/annotation) page $page	$page (AAA wiki)
AAAtalk	http://rana.lbl.gov/drosophila/wiki/index.php/Talk:$page	Fruitfly AAA (assembly/alignment/annotation) discussion for page $page
BioPerl	http://www.bioperl.org/wiki/$page	BioPerl wiki page $page
MathWorld	http://mathworld.wolfram.com/$page.html	'$page' on 'MathWorld'
MLpedia	http://www.mlpedia.org/index.php?title=$page	'$page' on 'MLpedia'
NCBO	http://bioontology.org/wiki/index.php/$page	'$page' on Bioontology wiki
Genbank	http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=$page	GENBANK entry $page
EMBL	http://www.ebi.ac.uk/cgi-bin/dbfetch?db=embl&style=html&id=$page	EMBL entry $page
Swiss	http://www.uniprot.org/uniprot/$page	Uniprot/Swissprot entry $page
PDB	http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=$page	PDB structure $page
Spotlight	http://www.expasy.org/spotlight/back_issues/sptlt$page.shtml	Protein Spotlight $page archive at Expasy
MolMonth	http://mgl.scripps.edu/people/goodsell/pdb/pdb$page	PDB Molecule of the Month $page archive at Scripps
Rfam	http://www.sanger.ac.uk/cgi-bin/Rfam/getacc?$page	RFAM family $page	TWiki.RfamNames
Pfam	http://pfam.sanger.ac.uk/family?acc=$page	PFAM family $page	TWiki.PfamNames
FBgn	http://flybase.bio.indiana.edu/.bin/fbidq.html?FBgn$page	Flybase gene $page
WormGene	http://www.wormbase.org/db/gene/gene?name=$page;class=Gene	Wormbase gene $page
GO	http://www.godatabase.org/cgi-bin/amigo/go.cgi?view=details&search_constraint=terms&depth=0&query=GO:$page	Gene ontology term $page
Phyloinformatics	https://www.nescent.org/wg/phyloinformatics/index.php?title=$page	NESCENT Phyloinformatics wiki page $page
Sourceforge	http://$page.sourceforge.net/	$page.sourceforge.net
CPAN	http://search.cpan.org/dist/$page	CPAN documentation for $page
CPANBio	http://search.cpan.org/~sendu/bioperl-1.5.2_102/Bio/$page	CPAN documentation for Bio/$page
GMOD	http://gmod.org/wiki/$page	GMOD wiki page $page
OpenWetWare	http://openwetware.org/wiki/$page	openwetware.org wiki page $page

How to define Inter-Site links

Inter-Site links are defined in the tables below.
Each entry must be of format:
| External site alias | URL | Tooltip help text |.
The URL and Tooltip Text may contain optional $page variables; the variable gets expanded to the page name.
The optional "Name service" column can contain:
1. a page name of the form "Web.Topic", leading to a page on which there is a table mapping $page to link names;
2. a URL involving $page, which will be called to get the link name;
3. a simple text expression that (like the Tooltip) can use the $page variable (underscores will be replaced by spaces, solely to make Wikipedia links look nice);
4. the default (if the column is empty) is Alias:$page
Note: The Tooltip Text must not contain any HTML tags (including <nop> escape code), no internal WikiWord links, and no external links. Hint: Escape 'WikiWords' and '$page'.

General Inter-Site Links

Alias:	URL:	Tooltip Text:
Acronym	http://www.acronymfinder.com/af-query.asp?Acronym=$page&String=exact	Look up '$page' on Acronym Finder site
Dictionary	http://www.dictionary.com/cgi-bin/dict.pl?term=	Look up '$page' at Dictionary.com
Google	http://google.com/search?q=	Search for '$page' on Google
Group	http://groups.google.com/groups?hl=en&safe=off&group=	News group '$page' at Google.com
ISBN	http://en.wikipedia.org/w/index.php?title=Special:Booksources&isbn=$page#Booksellers	Wikipedia Booksources for ISBN#$page (One click patent? Say no to Amazon!)
RFC	http://www.faqs.org/rfcs/rfc$page.html	IETF RFC #$page
IMDB	http://www.imdb.com/title/tt$page/	IMDB entry $page

Inter-Wiki Links

Alias:	URL:	Tooltip Text:	Name service (optional):
HammondWiki	http://www.dairiki.org/HammondWiki/index.php3?	'$page' on 'HammondWiki' site
LegoWiki	http://www.object-arts.com/wiki/html/Lego-Robotics/	'$page' on 'LegoWiki' site
MeatBall	http://www.usemod.com/cgi-bin/mb.pl?	'$page' on 'MeatBall' site, a 'UseMod' Wiki variant
MoinMoin	http://moin.sourceforge.net/cgi-bin/moin/moin/	'$page' on 'MoinMoin' Wiki site
MuWeb	http://www.dunstable.com/scripts/MuWebWeb?	'$page' on 'MuWeb' site
PolitizenWiki	http://www.politizen.com/wiki.asp?	'$page' on 'PolitizenWiki' site
UseMod	http://www.usemod.com/cgi-bin/wiki.pl?	'$page' on 'UseMod' Wiki site
MbTest	http://www.usemod.com/cgi-bin/mbtest.pl?	'$page' on 'UseMod' Wiki variant
VisualWorks	http://wiki.cs.uiuc.edu/VisualWorks/	'$page' on 'VisualWorks' site
Wikipedia	http://en.wikipedia.org/wiki/$page	'$page' on 'Wikipedia'	$page (Wikipedia)
DecafBad	http://www.decafbad.com/twiki/bin/view/Main/	'$page' on 0xDECAFBAD
Advogato	http://www.advogato.org/	'$page' on Advogato community site (with peer review)
DolphinWiki	http://www.object-arts.co.uk/wiki/html/Dolphin/$page.htm	'$page' on Dolphin Wiki site
FoxWiki	http://fox.wikis.com/wc.dll?Wiki~	'$page' on Fox Wiki site
OrgPatterns	http://www.easycomp.org/cgi-bin/OrgPatterns?	'$page' on Organizational Patterns site
Squeak	http://minnow.cc.gatech.edu/squeak/	'$page' on Squeak Smalltalk Wiki
PPR	http://c2.com/cgi/wiki?	'$page' on the original 'PortlandPatternRepository' site
Wiki	http://c2.com/cgi/wiki?	'$page' on the original 'WikiWikiWeb' site
TWiki	http://twiki.org/cgi-bin/view/	'$page' on TWiki.org
PhpWiki	http://phpwiki.sourceforge.net/phpwiki/index.php3?	'$page' on Wiki site written in PHP
PyWiki	http://www.voght.com/cgi-bin/pywiki?	'$page' on Wiki site written in Python
ZWiki	http://joyful.com/zwiki/	'$page' on Zope's Wiki
C2find	http://c2.com/cgi/wiki?FindPage&value=	Search '$page' on the original 'WikiWikiWeb' site

Access Control Settings

Users or groups allowed to change or rename this InterWikis topic: (ex: TWikiAdminGroup)
- Set ALLOWTOPICCHANGE = TWikiAdminGroup
- Set ALLOWTOPICRENAME = TWikiAdminGroup

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