• 12 fly scan

• Gene prediction tools
  • enembl.org/apollo
  • gff2ps
  • rgd.mcw.edu/metagene
  • promoter pred: rulai.cshl.org/tools/firstef
  • fruitfly.org/seq_tools/genie.html
  • genes.mit.edu/genscan.html

• Create workflow diagrams for Xrate training and prediction.

• Does Ant compile on cluster?

Quals

• Proposal:
  • Primary: ncRna pipeline
  • Secondary: using discriminative training

-- TWikiGuest - 21 Jul 2006