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Makefile lab meeting

12 noon, Wednesday 4/4, 2007, 425 Hearst Mining Building (see LabMeetings)

The topic of this meeting was the use of automated build tools for bioinformatics pipelines. (See, for example, this intro on, or this article by Chris Lee.)


The conclusions of the meeting are summarized on the MakeComparison page.

Miscellaneous notes

George recommended Rose-DB as a Perl database interface.


Proposed assignments in parentheses.

A few practical issues to think about:

  • What's real (i.e. implemented)?
  • What's re-useable?
  • What fancy systems could be real, with a little work?
  • What could you do with those fancy systems that you couldn't do before?

-- MadeGuys - 21 Mar 2007

I AttachmentSorted ascending History Action Size Date Who Comment
Pdfpdf makeAlternatives.pdf r1 manage 210.9 K 2007-04-04 - 23:25 YuriBendana Yuri's presentation
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