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EvolDoer (formerly 'tkfstalign')

EvolDoer is a program for pairwise RNA structural-phylo alignment operations based on the TKF Structure Tree model.

It is part of the EvolDeeds package, which itself is distributed as part of the DART package.

EvolDoer's pair grammars can be viewed as TreeTransducers: combinable machines for analysis of RNA structural alignments.


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