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| AMI changelog
Amazon machine images published by the Holmes lab.
32-bit images
- ami-8ff312e6 (handalign image; 5/01/09 image with latest git pull; 7/10/09)
64-bit images
- ami-346c8b5d (based on CentOS5 ami-31c72258 from Right Scale; mostly the same content as 32-bit image from 4/3/09, i.e. dart, jbrowse, hmmoc, etc., but no Bioperl or JSON.pm yet; 4/3/09)
Obsolete images
These struck-out AMIs indicate obsolete images which have been deleted or overwritten.
They are preserved here as a changelog.
32-bit:
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ami-f3ac4a9a (handalign image; 4/15/09 image with s3curl.pl; 5/01/09)
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ami-4340a72a (handalign image; 4/3/09 image with latest dart pull, compiled handalign/hmmoc binaries in /usr/local/handalign_tmp; 4/15/09)
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ami-7c6c8b15 (based on 4/2/09 image; installed emacs, increased java heapsize for hmmoc, pulled latest dart/jbrowse & rebuilt, added /etc/profile.d/dart.sh script to set env vars, cleaned up; 4/3/09)
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ami-6360870a (based on 3/16/09 image; pulled dart & latest jbrowse from github; hmmoc 1.3; gconstructor, gsimulator, gfftools, perl from cvs.biowiki.org; TWiki 4.3.0; 4/2/2009)
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ami-c23ed9ab (based on Fedora 8 AMI; installed Bioperl, JSON.pm from CPAN; Apache; pulled JBrowse from github; 3/16/2009)
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ami-3634d35f (based on Fedora 8 AMI; checked out dart from Sourceforge via CVS; hmmoc 1.3; 3/13/2009)
64-bit:
TODO
For future revisions of the AMIs:
- add /usr/local/dart/perl to PATH in /etc/profile.d/dart.sh
- create csh/tcsh version of sh/bash script /etc/profile.d/dart.sh
- install Bioperl & JSON.pm on the 64-bit AMI
- add boot script to 'git pull' the latest versions of dart & jbrowse
- install FSA/AMAP and other Cluster Software
Links
For more info, including instructions on how to launch an Amazon EC2 instance from one of these images, see
-- IanHolmes - 02 Apr 2009 |
