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---+ BioWiki

Welcome to [[http://biowiki.org][biowiki.org]].
This site hosts [[http://en.wikipedia.org/wiki/Wiki][wikis]] for various computational biology projects.

Right now you're in the [[Main.WebTopicList][Main web]], used mostly as an online lab notebook by the [[Holmes lab]] at UC Berkeley.
Anyone can edit almost any page, so please feel free to contribute content.

You may have come here for

   * [[JBrowse.WebHome][JBrowse]], a genome browser;

   * the DART package, a suite of tools for probabilistic sequence analysis, molecular [[evolutionary simulations]] and [[phylogenetic alignment]];
      * programs include [[XrateProgram][xrate]], [[StemLoc][stemloc]], [[HandelPackage][Handel]], [[Evol Deeds]] and more;

   * one of our [[Teaching.CompbioTeaching][compbio classes]] at UC Berkeley.

Other webs hosted here include

   * the [[Blog.WebHome][Blog web]], for sporadic postings of compbio links and literature refs;
   * the [[TWiki.WebHome][TWiki web]] for documentation on how this site works;
   * the [[Sandbox.WebHome][Sandbox web]] to practice editing pages using this site's wiki syntax.


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