Bio Wiki

Welcome to biowiki.org. This site hosts wikis for computational biology projects of the Holmes lab at UC Berkeley.

You may have come here for

• JBrowse, a genome browser;

• the DART package, a suite of tools for probabilistic sequence analysis, molecular evolutionary simulations and phylogenetic alignment;
  • programs include xrate, stemloc, Handel, EvolDeeds

• one of our compbio classes at UC Berkeley.

Other webs hosted here include

• the Blog web, for sporadic postings of compbio links and literature refs;
• the TWiki web for documentation on how this site works;
• the Sandbox web to practice editing pages using this site's wiki syntax.